Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.04■□□□□ -0
Col6a6Q8C6K9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Gm7862-201ENSMUST00000121461 292 ntBASIC15.04■□□□□ -0
Col6a6Q8C6K9 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.04■□□□□ -0
Col6a6Q8C6K9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col6a6Q8C6K9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm23935-201ENSMUST00000102303 57 ntBASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm24270-201ENSMUST00000102326 57 ntBASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm24245-201ENSMUST00000157318 57 ntBASIC15.03■□□□□ -0
Col6a6Q8C6K9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm13312-201ENSMUST00000119631 718 ntBASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.03■□□□□ -0
Col6a6Q8C6K9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.03■□□□□ -0
Col6a6Q8C6K9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a6Q8C6K9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a6Q8C6K9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a6Q8C6K9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a6Q8C6K9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Col6a6Q8C6K9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a6Q8C6K9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a6Q8C6K9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col6a6Q8C6K9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Col6a6Q8C6K9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Gm8000-201ENSMUST00000188378 592 ntBASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a6Q8C6K9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a6Q8C6K9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Gm7230-201ENSMUST00000173026 815 ntBASIC15□□□□□ -0.01
Col6a6Q8C6K9 Auts2-212ENSMUST00000178555 309 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms