Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Gm13836-201ENSMUST00000121159 501 ntBASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp44Q8C2S0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp44Q8C2S0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp44Q8C2S0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Gm6659-201ENSMUST00000174752 547 ntBASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp44Q8C2S0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp44Q8C2S0 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.53■□□□□ 0.72
Usp44Q8C2S0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms