Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim35Q8C006 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim35Q8C006 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trim35Q8C006 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim35Q8C006 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.35■□□□□ 0.37
Trim35Q8C006 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim35Q8C006 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim35Q8C006 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim35Q8C006 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.35■□□□□ 0.37
Trim35Q8C006 Gm37857-201ENSMUST00000191784 1199 ntBASIC17.35■□□□□ 0.37
Trim35Q8C006 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.35■□□□□ 0.37
Trim35Q8C006 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC17.35■□□□□ 0.37
Trim35Q8C006 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim35Q8C006 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.35■□□□□ 0.37
Trim35Q8C006 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.35■□□□□ 0.37
Trim35Q8C006 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim35Q8C006 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim35Q8C006 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim35Q8C006 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim35Q8C006 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim35Q8C006 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC17.34■□□□□ 0.37
Trim35Q8C006 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim35Q8C006 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim35Q8C006 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim35Q8C006 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Trim35Q8C006 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trim35Q8C006 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim35Q8C006 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.33■□□□□ 0.37
Trim35Q8C006 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim35Q8C006 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim35Q8C006 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trim35Q8C006 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.33■□□□□ 0.37
Trim35Q8C006 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trim35Q8C006 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Mir706-201ENSMUST00000102262 84 ntBASIC17.33■□□□□ 0.36
Trim35Q8C006 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim35Q8C006 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
Trim35Q8C006 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Gm45925-201ENSMUST00000218882 744 ntBASIC17.33■□□□□ 0.36
Trim35Q8C006 Gm18025-201ENSMUST00000221733 862 ntBASIC17.33■□□□□ 0.36
Trim35Q8C006 AC154441.1-201ENSMUST00000223653 1006 ntBASIC17.33■□□□□ 0.36
Trim35Q8C006 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Trim35Q8C006 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim35Q8C006 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim35Q8C006 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms