Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.86■□□□□ 0.29
Ubr7Q8BU04 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr7Q8BU04 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Gm28033-201ENSMUST00000184224 96 ntBASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ubr7Q8BU04 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Mir3081-201ENSMUST00000175305 84 ntBASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Gm18669-201ENSMUST00000216049 778 ntBASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ubr7Q8BU04 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ubr7Q8BU04 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ubr7Q8BU04 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ubr7Q8BU04 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubr7Q8BU04 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr7Q8BU04 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms