Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm44450-201ENSMUST00000199528 114 ntBASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk5rap1Q8BTW8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm27357-201ENSMUST00000183754 135 ntBASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm29707-201ENSMUST00000196325 491 ntBASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm18669-201ENSMUST00000216049 778 ntBASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Mir3081-201ENSMUST00000175305 84 ntBASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap1Q8BTW8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk5rap1Q8BTW8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk5rap1Q8BTW8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk5rap1Q8BTW8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm18421-201ENSMUST00000204122 625 ntBASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cdk5rap1Q8BTW8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms