Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp1r3eQ8BRJ4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm27000-201ENSMUST00000182943 842 ntBASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp1r3eQ8BRJ4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp1r3eQ8BRJ4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ppp1r3eQ8BRJ4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ppp1r3eQ8BRJ4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms