Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco3Q8BQM7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.83□□□□□ -0.19
Smco3Q8BQM7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smco3Q8BQM7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smco3Q8BQM7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smco3Q8BQM7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smco3Q8BQM7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smco3Q8BQM7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smco3Q8BQM7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smco3Q8BQM7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smco3Q8BQM7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.81□□□□□ -0.2
Smco3Q8BQM7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Gm7514-201ENSMUST00000209475 934 ntBASIC13.8□□□□□ -0.2
Smco3Q8BQM7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms