Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sfr1Q8BP27 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Gm18101-201ENSMUST00000215769 548 ntBASIC17■□□□□ 0.31
Sfr1Q8BP27 Gm18032-201ENSMUST00000222541 538 ntBASIC17■□□□□ 0.31
Sfr1Q8BP27 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sfr1Q8BP27 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sfr1Q8BP27 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17■□□□□ 0.31
Sfr1Q8BP27 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Gm10013-201ENSMUST00000106074 672 ntBASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Gm22697-201ENSMUST00000175194 63 ntBASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sfr1Q8BP27 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.98■□□□□ 0.31
Sfr1Q8BP27 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sfr1Q8BP27 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Gm27389-201ENSMUST00000183622 195 ntBASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms