Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Gm10698-201ENSMUST00000182663 604 ntBASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf38Q8BI21 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Rnf38Q8BI21 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Gm17661-201ENSMUST00000170317 270 ntBASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf38Q8BI21 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Gm15378-201ENSMUST00000121894 207 ntBASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Gm27000-201ENSMUST00000182943 842 ntBASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf38Q8BI21 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Gm22240-201ENSMUST00000175225 82 ntBASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf38Q8BI21 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms