Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smndc1Q8BGT7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Gm37856-201ENSMUST00000191634 999 ntBASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smndc1Q8BGT7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.27■□□□□ 0.19
Smndc1Q8BGT7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Gm13168-201ENSMUST00000121771 632 ntBASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smndc1Q8BGT7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Gm12896-201ENSMUST00000118430 226 ntBASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.25■□□□□ 0.19
Smndc1Q8BGT7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Gm2559-201ENSMUST00000201323 363 ntBASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smndc1Q8BGT7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smndc1Q8BGT7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smndc1Q8BGT7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms