Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Gm11780-201ENSMUST00000136880 516 ntBASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Gm12497-201ENSMUST00000138778 237 ntBASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trnp1Q80ZI1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.84■□□□□ 0.61
Trnp1Q80ZI1 Gm8097-201ENSMUST00000117903 829 ntBASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.83■□□□□ 0.6
Trnp1Q80ZI1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trnp1Q80ZI1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Gm4459-201ENSMUST00000118750 468 ntBASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trnp1Q80ZI1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms