Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lrrtm4Q80XG9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrtm4Q80XG9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lrrtm4Q80XG9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Mir770-201ENSMUST00000103252 94 ntBASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Gm29518-201ENSMUST00000190858 372 ntBASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrtm4Q80XG9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Gm6623-201ENSMUST00000173570 544 ntBASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Gm17808-201ENSMUST00000200859 894 ntBASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrtm4Q80XG9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Gm11950-201ENSMUST00000121615 838 ntBASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrtm4Q80XG9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrtm4Q80XG9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrtm4Q80XG9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrtm4Q80XG9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrtm4Q80XG9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrtm4Q80XG9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrtm4Q80XG9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrtm4Q80XG9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrtm4Q80XG9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.26■□□□□ 0.19
Lrrtm4Q80XG9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms