Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Phf7-203ENSMUST00000226565 1971 ntBASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Gm17807-201ENSMUST00000186869 298 ntBASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh19Q80TF3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh19Q80TF3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh19Q80TF3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh19Q80TF3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms