Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Rpap1Q80TE0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Rpap1Q80TE0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Rpap1Q80TE0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Gm37584-201ENSMUST00000193595 1290 ntBASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Gm6550-201ENSMUST00000187574 993 ntBASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Gm43935-201ENSMUST00000203569 1050 ntBASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC25.88■■□□□ 1.73
Rpap1Q80TE0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 AV026068-213ENSMUST00000223675 1171 ntBASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Gm9889-202ENSMUST00000206983 1577 ntBASIC25.87■■□□□ 1.73
Rpap1Q80TE0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Rarb-207ENSMUST00000225921 2756 ntBASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Gm14822-201ENSMUST00000122247 291 ntBASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Gm8349-201ENSMUST00000182720 1003 ntBASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Gm7507-201ENSMUST00000183053 1008 ntBASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Gm2756-201ENSMUST00000195851 400 ntBASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rpap1Q80TE0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 AC225888.1-201ENSMUST00000227184 728 ntBASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rpap1Q80TE0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Rpap1Q80TE0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC25.83■■□□□ 1.73
Rpap1Q80TE0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rpap1Q80TE0 Gm13036-201ENSMUST00000117799 748 ntBASIC25.83■■□□□ 1.73
Rpap1Q80TE0 Gm8097-201ENSMUST00000117903 829 ntBASIC25.83■■□□□ 1.73
Rpap1Q80TE0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC25.83■■□□□ 1.73
Rpap1Q80TE0 Gm27628-201ENSMUST00000184911 107 ntBASIC25.83■■□□□ 1.73
Rpap1Q80TE0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rpap1Q80TE0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC25.83■■□□□ 1.73
Rpap1Q80TE0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC25.83■■□□□ 1.73
Rpap1Q80TE0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Rpap1Q80TE0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Gm12497-201ENSMUST00000138778 237 ntBASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Gm6089-201ENSMUST00000197666 938 ntBASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpap1Q80TE0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC25.82■■□□□ 1.72
Rpap1Q80TE0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms