Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ush1gQ80T11 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ush1gQ80T11 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ush1gQ80T11 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ush1gQ80T11 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ush1gQ80T11 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ush1gQ80T11 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ush1gQ80T11 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.25■□□□□ 0.51
Ush1gQ80T11 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.25■□□□□ 0.51
Ush1gQ80T11 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.25■□□□□ 0.51
Ush1gQ80T11 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ush1gQ80T11 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ush1gQ80T11 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ush1gQ80T11 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.24■□□□□ 0.51
Ush1gQ80T11 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ush1gQ80T11 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ush1gQ80T11 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ush1gQ80T11 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ush1gQ80T11 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ush1gQ80T11 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ush1gQ80T11 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ush1gQ80T11 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Gm27459-201ENSMUST00000184860 107 ntBASIC18.23■□□□□ 0.51
Ush1gQ80T11 Gm43347-201ENSMUST00000200226 580 ntBASIC18.23■□□□□ 0.51
Ush1gQ80T11 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ush1gQ80T11 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Gm15794-201ENSMUST00000120182 631 ntBASIC18.22■□□□□ 0.51
Ush1gQ80T11 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Gm5864-201ENSMUST00000202263 970 ntBASIC18.22■□□□□ 0.51
Ush1gQ80T11 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms