Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Gm6623-201ENSMUST00000173570 544 ntBASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf38bQ80SY5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Gm7638-201ENSMUST00000121348 967 ntBASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf38bQ80SY5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Gm2213-201ENSMUST00000197485 688 ntBASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf38bQ80SY5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf38bQ80SY5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Prpf38bQ80SY5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms