Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubfd1Q78JW9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Olfr129-201ENSMUST00000122318 993 ntBASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubfd1Q78JW9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubfd1Q78JW9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubfd1Q78JW9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubfd1Q78JW9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubfd1Q78JW9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms