Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Gm15467-201ENSMUST00000120582 445 ntBASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Ddx55Q6ZPL9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19■□□□□ 0.63
Ddx55Q6ZPL9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx55Q6ZPL9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Gm27702-201ENSMUST00000184512 56 ntBASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx55Q6ZPL9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Gm15173-201ENSMUST00000122049 433 ntBASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx55Q6ZPL9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.97■□□□□ 0.63
Ddx55Q6ZPL9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Ddx55Q6ZPL9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx55Q6ZPL9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.97■□□□□ 0.63
Ddx55Q6ZPL9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx55Q6ZPL9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx55Q6ZPL9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Ddx55Q6ZPL9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ddx55Q6ZPL9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ddx55Q6ZPL9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx55Q6ZPL9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx55Q6ZPL9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.96■□□□□ 0.63
Ddx55Q6ZPL9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx55Q6ZPL9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
Ddx55Q6ZPL9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms