Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ssx9Q6XAS3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssx9Q6XAS3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssx9Q6XAS3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssx9Q6XAS3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssx9Q6XAS3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Gm22240-201ENSMUST00000175225 82 ntBASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssx9Q6XAS3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Gm21814-202ENSMUST00000203277 873 ntBASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Gm10812-201ENSMUST00000099864 546 ntBASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssx9Q6XAS3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssx9Q6XAS3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssx9Q6XAS3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssx9Q6XAS3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssx9Q6XAS3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssx9Q6XAS3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssx9Q6XAS3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ssx9Q6XAS3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssx9Q6XAS3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssx9Q6XAS3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssx9Q6XAS3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms