Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Gm4459-201ENSMUST00000118750 468 ntBASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Gm25406-201ENSMUST00000157599 105 ntBASIC19.65■□□□□ 0.74
Nup98Q6PFD9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.65■□□□□ 0.74
Nup98Q6PFD9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup98Q6PFD9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Nup98Q6PFD9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nup98Q6PFD9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Nup98Q6PFD9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup98Q6PFD9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.63■□□□□ 0.73
Nup98Q6PFD9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Gm27525-201ENSMUST00000184465 107 ntBASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup98Q6PFD9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Gm6376-201ENSMUST00000209407 580 ntBASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Gm10060-201ENSMUST00000212002 111 ntBASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Nup98Q6PFD9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nup98Q6PFD9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms