Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dhx40Q6PE54 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Gm37025-201ENSMUST00000195159 829 ntBASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dhx40Q6PE54 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Dhx40Q6PE54 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Dhx40Q6PE54 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Dhx40Q6PE54 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Dhx40Q6PE54 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Dhx40Q6PE54 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Dhx40Q6PE54 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Dhx40Q6PE54 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Dhx40Q6PE54 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Dhx40Q6PE54 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dhx40Q6PE54 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.58■□□□□ 0.56
Dhx40Q6PE54 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dhx40Q6PE54 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dhx40Q6PE54 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Dhx40Q6PE54 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Dhx40Q6PE54 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Dhx40Q6PE54 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Dhx40Q6PE54 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dhx40Q6PE54 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Dhx40Q6PE54 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dhx40Q6PE54 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms