Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Gm10052-201ENSMUST00000168019 960 ntBASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Gm7729-201ENSMUST00000050143 801 ntBASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm3aQ6PCM1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Kdm3aQ6PCM1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Kdm3aQ6PCM1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Olfr129-201ENSMUST00000122318 993 ntBASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Kdm3aQ6PCM1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Gm44430-201ENSMUST00000203376 995 ntBASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm3aQ6PCM1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm3aQ6PCM1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Kdm3aQ6PCM1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm3aQ6PCM1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm3aQ6PCM1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm3aQ6PCM1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm3aQ6PCM1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm3aQ6PCM1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Kdm3aQ6PCM1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm3aQ6PCM1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm3aQ6PCM1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Gm28033-201ENSMUST00000184224 96 ntBASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms