Protein–RNA interactions for Protein: Q6P9P0

Slf2, SMC5-SMC6 complex localization factor protein 2, mousemouse

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf2Q6P9P0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf2Q6P9P0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf2Q6P9P0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf2Q6P9P0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf2Q6P9P0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf2Q6P9P0 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.64■□□□□ 0.89
Slf2Q6P9P0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slf2Q6P9P0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf2Q6P9P0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf2Q6P9P0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf2Q6P9P0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.62■□□□□ 0.89
Slf2Q6P9P0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.62■□□□□ 0.89
Slf2Q6P9P0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Mir5131-201ENSMUST00000175426 93 ntBASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf2Q6P9P0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf2Q6P9P0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Gm8969-201ENSMUST00000199694 526 ntBASIC20.59■□□□□ 0.89
Slf2Q6P9P0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slf2Q6P9P0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms