Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.33■□□□□ 0.53
Smchd1Q6P5D8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smchd1Q6P5D8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Smchd1Q6P5D8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smchd1Q6P5D8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smchd1Q6P5D8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smchd1Q6P5D8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smchd1Q6P5D8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.33■□□□□ 0.52
Smchd1Q6P5D8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.33■□□□□ 0.52
Smchd1Q6P5D8 Gm7461-201ENSMUST00000058918 827 ntBASIC18.33■□□□□ 0.52
Smchd1Q6P5D8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smchd1Q6P5D8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smchd1Q6P5D8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Gm24589-201ENSMUST00000116692 94 ntBASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smchd1Q6P5D8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smchd1Q6P5D8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smchd1Q6P5D8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smchd1Q6P5D8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smchd1Q6P5D8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smchd1Q6P5D8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smchd1Q6P5D8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.27■□□□□ 0.52
Smchd1Q6P5D8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smchd1Q6P5D8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smchd1Q6P5D8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smchd1Q6P5D8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smchd1Q6P5D8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Smchd1Q6P5D8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smchd1Q6P5D8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smchd1Q6P5D8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms