Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtl3Q6P1Y1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rtl3Q6P1Y1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtl3Q6P1Y1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtl3Q6P1Y1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtl3Q6P1Y1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtl3Q6P1Y1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtl3Q6P1Y1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Gm25016-201ENSMUST00000158399 131 ntBASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rtl3Q6P1Y1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Gm14859-201ENSMUST00000117752 357 ntBASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Gm9103-201ENSMUST00000119371 405 ntBASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rtl3Q6P1Y1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rtl3Q6P1Y1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.27■□□□□ 0.35
Rtl3Q6P1Y1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtl3Q6P1Y1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rtl3Q6P1Y1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtl3Q6P1Y1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.27■□□□□ 0.35
Rtl3Q6P1Y1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rtl3Q6P1Y1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Gm13186-201ENSMUST00000118031 316 ntBASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtl3Q6P1Y1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms