Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sp140Q6NSQ5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sp140Q6NSQ5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sp140Q6NSQ5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sp140Q6NSQ5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.97■□□□□ 0.31
Sp140Q6NSQ5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sp140Q6NSQ5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sp140Q6NSQ5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.97■□□□□ 0.31
Sp140Q6NSQ5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sp140Q6NSQ5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sp140Q6NSQ5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sp140Q6NSQ5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sp140Q6NSQ5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sp140Q6NSQ5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sp140Q6NSQ5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sp140Q6NSQ5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sp140Q6NSQ5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Gm27463-201ENSMUST00000183569 57 ntBASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sp140Q6NSQ5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Gm37055-201ENSMUST00000191866 133 ntBASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sp140Q6NSQ5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms