Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Krt40Q6IFX3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt40Q6IFX3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt40Q6IFX3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt40Q6IFX3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.65■□□□□ 0.74
Krt40Q6IFX3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt40Q6IFX3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Krt40Q6IFX3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Krt40Q6IFX3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Gm13312-201ENSMUST00000119631 718 ntBASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Gm34391-201ENSMUST00000203706 907 ntBASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Krt40Q6IFX3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Gm15372-201ENSMUST00000120729 834 ntBASIC19.63■□□□□ 0.73
Krt40Q6IFX3 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Birc2-201ENSMUST00000054878 378 ntBASIC19.63■□□□□ 0.73
Krt40Q6IFX3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Krt40Q6IFX3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt40Q6IFX3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Gm24589-201ENSMUST00000116692 94 ntBASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Krt40Q6IFX3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt40Q6IFX3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Krt40Q6IFX3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt40Q6IFX3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms