Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm16061-201ENSMUST00000122167 857 ntBASIC17.82■□□□□ 0.44
Six2Q62232 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Six2Q62232 Gm44450-201ENSMUST00000199528 114 ntBASIC17.82■□□□□ 0.44
Six2Q62232 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Six2Q62232 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Six2Q62232 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.82■□□□□ 0.44
Six2Q62232 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Six2Q62232 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Six2Q62232 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.81■□□□□ 0.44
Six2Q62232 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.81■□□□□ 0.44
Six2Q62232 Gm43799-201ENSMUST00000201845 579 ntBASIC17.81■□□□□ 0.44
Six2Q62232 Gm10252-201ENSMUST00000209541 832 ntBASIC17.81■□□□□ 0.44
Six2Q62232 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Six2Q62232 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six2Q62232 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Six2Q62232 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.8■□□□□ 0.44
Six2Q62232 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.8■□□□□ 0.44
Six2Q62232 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.8■□□□□ 0.44
Six2Q62232 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Six2Q62232 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six2Q62232 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.8■□□□□ 0.44
Six2Q62232 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six2Q62232 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six2Q62232 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six2Q62232 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.79■□□□□ 0.44
Six2Q62232 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six2Q62232 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Six2Q62232 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six2Q62232 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.79■□□□□ 0.44
Six2Q62232 Gm7889-201ENSMUST00000185591 958 ntBASIC17.79■□□□□ 0.44
Six2Q62232 Gm7213-201ENSMUST00000215977 950 ntBASIC17.79■□□□□ 0.44
Six2Q62232 Gm18115-201ENSMUST00000221209 621 ntBASIC17.79■□□□□ 0.44
Six2Q62232 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six2Q62232 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Six2Q62232 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six2Q62232 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six2Q62232 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six2Q62232 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.78■□□□□ 0.44
Six2Q62232 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.78■□□□□ 0.44
Six2Q62232 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Gm15565-201ENSMUST00000118890 427 ntBASIC17.78■□□□□ 0.44
Six2Q62232 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Six2Q62232 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Six2Q62232 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Six2Q62232 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.78■□□□□ 0.44
Six2Q62232 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
Six2Q62232 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six2Q62232 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms