Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.67■□□□□ 0.1
VcanQ62059 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.67■□□□□ 0.1
VcanQ62059 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.67■□□□□ 0.1
VcanQ62059 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
VcanQ62059 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.67■□□□□ 0.1
VcanQ62059 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VcanQ62059 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
VcanQ62059 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.67■□□□□ 0.1
VcanQ62059 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.67■□□□□ 0.1
VcanQ62059 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.67■□□□□ 0.1
VcanQ62059 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VcanQ62059 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VcanQ62059 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VcanQ62059 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VcanQ62059 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VcanQ62059 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VcanQ62059 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VcanQ62059 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VcanQ62059 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VcanQ62059 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VcanQ62059 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VcanQ62059 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VcanQ62059 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VcanQ62059 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.66■□□□□ 0.1
VcanQ62059 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.66■□□□□ 0.1
VcanQ62059 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VcanQ62059 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.66■□□□□ 0.1
VcanQ62059 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VcanQ62059 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.65■□□□□ 0.1
VcanQ62059 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
VcanQ62059 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
VcanQ62059 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VcanQ62059 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.65■□□□□ 0.1
VcanQ62059 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VcanQ62059 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.65■□□□□ 0.1
VcanQ62059 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.64■□□□□ 0.09
VcanQ62059 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.64■□□□□ 0.09
VcanQ62059 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.64■□□□□ 0.09
VcanQ62059 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.64■□□□□ 0.09
VcanQ62059 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.64■□□□□ 0.09
VcanQ62059 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Mir7023-201ENSMUST00000185093 64 ntBASIC15.64■□□□□ 0.09
VcanQ62059 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.64■□□□□ 0.09
VcanQ62059 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.64■□□□□ 0.09
VcanQ62059 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.64■□□□□ 0.09
VcanQ62059 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VcanQ62059 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VcanQ62059 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VcanQ62059 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.63■□□□□ 0.09
VcanQ62059 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VcanQ62059 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
VcanQ62059 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VcanQ62059 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VcanQ62059 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VcanQ62059 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VcanQ62059 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VcanQ62059 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms