Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six4Q61321 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.88■□□□□ 0.29
Six4Q61321 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Six4Q61321 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six4Q61321 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Six4Q61321 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six4Q61321 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six4Q61321 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Six4Q61321 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six4Q61321 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Six4Q61321 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.87■□□□□ 0.29
Six4Q61321 Gm37722-201ENSMUST00000193757 208 ntBASIC16.87■□□□□ 0.29
Six4Q61321 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Six4Q61321 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.87■□□□□ 0.29
Six4Q61321 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.87■□□□□ 0.29
Six4Q61321 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.87■□□□□ 0.29
Six4Q61321 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Six4Q61321 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six4Q61321 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Six4Q61321 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Gm6659-201ENSMUST00000174752 547 ntBASIC16.86■□□□□ 0.29
Six4Q61321 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Six4Q61321 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.86■□□□□ 0.29
Six4Q61321 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six4Q61321 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.86■□□□□ 0.29
Six4Q61321 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.85■□□□□ 0.29
Six4Q61321 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Six4Q61321 Gm18421-201ENSMUST00000204122 625 ntBASIC16.85■□□□□ 0.29
Six4Q61321 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Six4Q61321 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Six4Q61321 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.85■□□□□ 0.29
Six4Q61321 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six4Q61321 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Six4Q61321 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.84■□□□□ 0.29
Six4Q61321 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Gm11355-201ENSMUST00000121120 306 ntBASIC16.84■□□□□ 0.29
Six4Q61321 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.84■□□□□ 0.29
Six4Q61321 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.84■□□□□ 0.29
Six4Q61321 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Six4Q61321 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Six4Q61321 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Six4Q61321 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Six4Q61321 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms