Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.36□□□□□ -0.11
Clns1aQ61189 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Clns1aQ61189 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.35□□□□□ -0.11
Clns1aQ61189 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clns1aQ61189 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Mir2861-201ENSMUST00000175539 82 ntBASIC14.35□□□□□ -0.11
Clns1aQ61189 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Clns1aQ61189 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clns1aQ61189 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clns1aQ61189 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clns1aQ61189 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clns1aQ61189 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Clns1aQ61189 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clns1aQ61189 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clns1aQ61189 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clns1aQ61189 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Clns1aQ61189 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.34□□□□□ -0.11
Clns1aQ61189 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clns1aQ61189 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clns1aQ61189 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Clns1aQ61189 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clns1aQ61189 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clns1aQ61189 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Clns1aQ61189 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clns1aQ61189 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Clns1aQ61189 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Clns1aQ61189 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.33□□□□□ -0.12
Clns1aQ61189 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Clns1aQ61189 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clns1aQ61189 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Flg-201ENSMUST00000050758 1488 ntBASIC14.32□□□□□ -0.12
Clns1aQ61189 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Clns1aQ61189 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.32□□□□□ -0.12
Clns1aQ61189 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms