Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.97■□□□□ 0.31
Sdf4Q61112 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Sdf4Q61112 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdf4Q61112 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdf4Q61112 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdf4Q61112 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sdf4Q61112 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Sdf4Q61112 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdf4Q61112 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sdf4Q61112 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sdf4Q61112 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sdf4Q61112 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sdf4Q61112 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.96■□□□□ 0.3
Sdf4Q61112 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.95■□□□□ 0.3
Sdf4Q61112 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.95■□□□□ 0.3
Sdf4Q61112 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.95■□□□□ 0.3
Sdf4Q61112 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.95■□□□□ 0.3
Sdf4Q61112 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sdf4Q61112 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.95■□□□□ 0.3
Sdf4Q61112 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sdf4Q61112 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.94■□□□□ 0.3
Sdf4Q61112 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sdf4Q61112 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sdf4Q61112 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Gm7213-201ENSMUST00000215977 950 ntBASIC16.94■□□□□ 0.3
Sdf4Q61112 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Sdf4Q61112 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sdf4Q61112 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sdf4Q61112 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.94■□□□□ 0.3
Sdf4Q61112 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdf4Q61112 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.93■□□□□ 0.3
Sdf4Q61112 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.93■□□□□ 0.3
Sdf4Q61112 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Sdf4Q61112 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.93■□□□□ 0.3
Sdf4Q61112 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Sdf4Q61112 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.93■□□□□ 0.3
Sdf4Q61112 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
Sdf4Q61112 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.93■□□□□ 0.3
Sdf4Q61112 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sdf4Q61112 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sdf4Q61112 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdf4Q61112 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.92■□□□□ 0.3
Sdf4Q61112 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sdf4Q61112 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sdf4Q61112 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms