Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.35□□□□□ -0.27
Trav2Q5R1I9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav2Q5R1I9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav2Q5R1I9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav2Q5R1I9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav2Q5R1I9 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.33□□□□□ -0.27
Trav2Q5R1I9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Gm27704-201ENSMUST00000185094 107 ntBASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Gm10819-201ENSMUST00000099988 561 ntBASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav2Q5R1I9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms