Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Gm14859-201ENSMUST00000117752 357 ntBASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Gm11950-201ENSMUST00000121615 838 ntBASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav6d-4Q5R1I0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Gm7284-201ENSMUST00000131667 944 ntBASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-4Q5R1I0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Gm27704-201ENSMUST00000185094 107 ntBASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav6d-4Q5R1I0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-4Q5R1I0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms