Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm10138-203ENSMUST00000206952 366 ntBASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 AV356131-201ENSMUST00000206201 750 ntBASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms