Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn2bQ56A07 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Gm715-201ENSMUST00000117865 831 ntBASIC16.55■□□□□ 0.24
Scn2bQ56A07 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Gm17661-201ENSMUST00000170317 270 ntBASIC16.55■□□□□ 0.24
Scn2bQ56A07 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.55■□□□□ 0.24
Scn2bQ56A07 Gm10252-201ENSMUST00000209541 832 ntBASIC16.55■□□□□ 0.24
Scn2bQ56A07 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scn2bQ56A07 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.54■□□□□ 0.24
Scn2bQ56A07 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn2bQ56A07 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms