Protein–RNA interactions for Protein: Q52KE7

Ccnl1, Cyclin-L1, mousemouse

Known RBP Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnl1Q52KE7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Gm25990-201ENSMUST00000102440 86 ntBASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Gm13418-201ENSMUST00000119097 944 ntBASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Gm5264-201ENSMUST00000190584 848 ntBASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Gm2213-201ENSMUST00000197485 688 ntBASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccnl1Q52KE7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccnl1Q52KE7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ccnl1Q52KE7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccnl1Q52KE7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccnl1Q52KE7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Ccnl1Q52KE7 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.08■□□□□ 0.96
Ccnl1Q52KE7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccnl1Q52KE7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Gm15173-201ENSMUST00000122049 433 ntBASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Gm7230-201ENSMUST00000173026 815 ntBASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Gm4535-201ENSMUST00000182274 558 ntBASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Psmb5-202ENSMUST00000227257 622 ntBASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Gm10355-201ENSMUST00000097146 517 ntBASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccnl1Q52KE7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccnl1Q52KE7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccnl1Q52KE7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccnl1Q52KE7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms