Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rc3h1Q4VGL6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rc3h1Q4VGL6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rc3h1Q4VGL6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rc3h1Q4VGL6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.27■□□□□ 0.67
Rc3h1Q4VGL6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rc3h1Q4VGL6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.27■□□□□ 0.67
Rc3h1Q4VGL6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rc3h1Q4VGL6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rc3h1Q4VGL6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rc3h1Q4VGL6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rc3h1Q4VGL6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms