Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.03■□□□□ 0.48
R3hdm4Q4VBF2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Gm18421-201ENSMUST00000204122 625 ntBASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm4Q4VBF2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
R3hdm4Q4VBF2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
R3hdm4Q4VBF2 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.02■□□□□ 0.47
R3hdm4Q4VBF2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
R3hdm4Q4VBF2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
R3hdm4Q4VBF2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
R3hdm4Q4VBF2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.02■□□□□ 0.47
R3hdm4Q4VBF2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Gm6345-202ENSMUST00000180900 204 ntBASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
R3hdm4Q4VBF2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 AA414768-201ENSMUST00000121924 1257 ntBASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
R3hdm4Q4VBF2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
R3hdm4Q4VBF2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms