Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx49Q4FZF3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx49Q4FZF3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx49Q4FZF3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx49Q4FZF3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx49Q4FZF3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx49Q4FZF3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.39■□□□□ 0.69
Ddx49Q4FZF3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm13312-201ENSMUST00000119631 718 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Rprl3-201ENSMUST00000157400 290 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm27867-201ENSMUST00000184778 125 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44357-201ENSMUST00000195897 142 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm19658-201ENSMUST00000196231 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44367-201ENSMUST00000196836 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44350-201ENSMUST00000197197 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44390-201ENSMUST00000197533 144 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44313-201ENSMUST00000198018 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44486-201ENSMUST00000198508 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44454-201ENSMUST00000198541 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44314-201ENSMUST00000199263 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44394-201ENSMUST00000199558 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44484-201ENSMUST00000199873 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44466-201ENSMUST00000200264 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm44359-201ENSMUST00000200671 138 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx49Q4FZF3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Gm11594-201ENSMUST00000122313 162 ntBASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Gm44450-201ENSMUST00000199528 114 ntBASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx49Q4FZF3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Gm29707-201ENSMUST00000196325 491 ntBASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx49Q4FZF3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx49Q4FZF3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms