Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm25406-201ENSMUST00000157599 105 ntBASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.81■□□□□ 0.92
Shank3Q4ACU6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.81■□□□□ 0.92
Shank3Q4ACU6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Shank3Q4ACU6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.8■□□□□ 0.92
Shank3Q4ACU6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shank3Q4ACU6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shank3Q4ACU6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Gm5682-201ENSMUST00000173402 505 ntBASIC20.78■□□□□ 0.92
Shank3Q4ACU6 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank3Q4ACU6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.77■□□□□ 0.92
Shank3Q4ACU6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shank3Q4ACU6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Shank3Q4ACU6 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.77■□□□□ 0.91
Shank3Q4ACU6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.77■□□□□ 0.91
Shank3Q4ACU6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Shank3Q4ACU6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Shank3Q4ACU6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms