Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Defb28Q3V2L0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Defb28Q3V2L0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Defb28Q3V2L0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Defb28Q3V2L0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Defb28Q3V2L0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Defb28Q3V2L0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.08■□□□□ 0.17
Defb28Q3V2L0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Defb28Q3V2L0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Defb28Q3V2L0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Gm26308-201ENSMUST00000157768 69 ntBASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Defb28Q3V2L0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Auts2-212ENSMUST00000178555 309 ntBASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Gm6550-201ENSMUST00000187574 993 ntBASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Defb28Q3V2L0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Defb28Q3V2L0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Defb28Q3V2L0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms