Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Gm11355-201ENSMUST00000121120 306 ntBASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap2Q3V1H1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap2Q3V1H1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap2Q3V1H1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap2Q3V1H1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.14■□□□□ 0.66
Ckap2Q3V1H1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Ckap2Q3V1H1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.14■□□□□ 0.66
Ckap2Q3V1H1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ckap2Q3V1H1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms