Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
BC051142Q3V0M8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BC051142Q3V0M8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BC051142Q3V0M8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Gm27463-201ENSMUST00000183569 57 ntBASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BC051142Q3V0M8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Gm30025-201ENSMUST00000218555 728 ntBASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
BC051142Q3V0M8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.83■□□□□ 0.45
BC051142Q3V0M8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BC051142Q3V0M8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms