Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Gm45328-201ENSMUST00000210942 917 ntBASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Gm18669-201ENSMUST00000216049 778 ntBASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smcr8Q3UMB5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Gm11336-201ENSMUST00000118168 334 ntBASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Gm27742-201ENSMUST00000184667 60 ntBASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Gm17971-201ENSMUST00000190239 806 ntBASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smcr8Q3UMB5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Mir3081-201ENSMUST00000175305 84 ntBASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smcr8Q3UMB5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smcr8Q3UMB5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smcr8Q3UMB5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smcr8Q3UMB5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smcr8Q3UMB5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Smcr8Q3UMB5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms