Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.37■□□□□ 0.05
Spg11Q3UHA3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.36■□□□□ 0.05
Spg11Q3UHA3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Gm25948-201ENSMUST00000175334 112 ntBASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Mir449b-201ENSMUST00000104833 80 ntBASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Gm17968-201ENSMUST00000194902 784 ntBASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Gm43474-201ENSMUST00000196415 774 ntBASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Notumos-201ENSMUST00000151998 2659 ntBASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg11Q3UHA3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Gm11745-201ENSMUST00000121669 448 ntBASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms