Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a2Q3U962 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a2Q3U962 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a2Q3U962 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a2Q3U962 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a2Q3U962 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a2Q3U962 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a2Q3U962 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Col5a2Q3U962 Gm4459-201ENSMUST00000118750 468 ntBASIC19.8■□□□□ 0.76
Col5a2Q3U962 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.8■□□□□ 0.76
Col5a2Q3U962 Gm26308-201ENSMUST00000157768 69 ntBASIC19.8■□□□□ 0.76
Col5a2Q3U962 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col5a2Q3U962 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.8■□□□□ 0.76
Col5a2Q3U962 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col5a2Q3U962 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col5a2Q3U962 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col5a2Q3U962 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.8■□□□□ 0.76
Col5a2Q3U962 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col5a2Q3U962 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col5a2Q3U962 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Col5a2Q3U962 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Col5a2Q3U962 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col5a2Q3U962 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col5a2Q3U962 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col5a2Q3U962 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col5a2Q3U962 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.79■□□□□ 0.76
Col5a2Q3U962 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.79■□□□□ 0.76
Col5a2Q3U962 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.79■□□□□ 0.76
Col5a2Q3U962 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Col5a2Q3U962 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col5a2Q3U962 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.79■□□□□ 0.76
Col5a2Q3U962 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col5a2Q3U962 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col5a2Q3U962 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col5a2Q3U962 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.78■□□□□ 0.76
Col5a2Q3U962 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.78■□□□□ 0.76
Col5a2Q3U962 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col5a2Q3U962 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col5a2Q3U962 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col5a2Q3U962 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Col5a2Q3U962 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.78■□□□□ 0.76
Col5a2Q3U962 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col5a2Q3U962 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col5a2Q3U962 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col5a2Q3U962 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col5a2Q3U962 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col5a2Q3U962 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Col5a2Q3U962 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col5a2Q3U962 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.77■□□□□ 0.76
Col5a2Q3U962 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Col5a2Q3U962 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Col5a2Q3U962 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.75
Col5a2Q3U962 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col5a2Q3U962 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Gm7222-201ENSMUST00000117512 906 ntBASIC19.76■□□□□ 0.75
Col5a2Q3U962 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Mir8117-201ENSMUST00000184773 107 ntBASIC19.76■□□□□ 0.75
Col5a2Q3U962 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Col5a2Q3U962 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Col5a2Q3U962 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 Mir3113-201ENSMUST00000175478 76 ntBASIC19.75■□□□□ 0.75
Col5a2Q3U962 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col5a2Q3U962 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms