Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf180Q3U827 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf180Q3U827 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf180Q3U827 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rnf180Q3U827 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Gm8825-201ENSMUST00000182565 998 ntBASIC19.63■□□□□ 0.73
Rnf180Q3U827 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf180Q3U827 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.63■□□□□ 0.73
Rnf180Q3U827 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Rassf8-202ENSMUST00000058538 1131 ntBASIC19.63■□□□□ 0.73
Rnf180Q3U827 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf180Q3U827 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.62■□□□□ 0.73
Rnf180Q3U827 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Gm38319-201ENSMUST00000194537 1266 ntBASIC19.62■□□□□ 0.73
Rnf180Q3U827 Gm7653-201ENSMUST00000214567 508 ntBASIC19.62■□□□□ 0.73
Rnf180Q3U827 AC125350.2-201ENSMUST00000224737 727 ntBASIC19.62■□□□□ 0.73
Rnf180Q3U827 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.62■□□□□ 0.73
Rnf180Q3U827 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf180Q3U827 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Gm15427-201ENSMUST00000117288 531 ntBASIC19.61■□□□□ 0.73
Rnf180Q3U827 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.61■□□□□ 0.73
Rnf180Q3U827 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf180Q3U827 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.6■□□□□ 0.73
Rnf180Q3U827 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.6■□□□□ 0.73
Rnf180Q3U827 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Gm27646-201ENSMUST00000183989 110 ntBASIC19.6■□□□□ 0.73
Rnf180Q3U827 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf180Q3U827 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf180Q3U827 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.59■□□□□ 0.73
Rnf180Q3U827 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Rnf180Q3U827 Gm11745-201ENSMUST00000121669 448 ntBASIC19.59■□□□□ 0.73
Rnf180Q3U827 Gm4899-201ENSMUST00000178708 719 ntBASIC19.59■□□□□ 0.73
Rnf180Q3U827 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf180Q3U827 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.59■□□□□ 0.73
Rnf180Q3U827 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.59■□□□□ 0.73
Rnf180Q3U827 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf180Q3U827 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf180Q3U827 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf180Q3U827 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rnf180Q3U827 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rnf180Q3U827 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf180Q3U827 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms