Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Gm16061-201ENSMUST00000122167 857 ntBASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdnep1Q3TP92 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctdnep1Q3TP92 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Gm44450-201ENSMUST00000199528 114 ntBASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Gm7213-201ENSMUST00000215977 950 ntBASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.3■□□□□ 0.68
Ctdnep1Q3TP92 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctdnep1Q3TP92 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Mir6982-201ENSMUST00000184354 68 ntBASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctdnep1Q3TP92 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms