Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Khdc4Q3TCX3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Khdc4Q3TCX3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Khdc4Q3TCX3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Khdc4Q3TCX3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Khdc4Q3TCX3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Khdc4Q3TCX3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Gm5587-201ENSMUST00000206270 674 ntBASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Khdc4Q3TCX3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Gm27704-201ENSMUST00000185094 107 ntBASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Il3ra-202ENSMUST00000223589 738 ntBASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Khdc4Q3TCX3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Khdc4Q3TCX3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Khdc4Q3TCX3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
Khdc4Q3TCX3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Gm9013-201ENSMUST00000132939 882 ntBASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Khdc4Q3TCX3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Gm29518-201ENSMUST00000190858 372 ntBASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Khdc4Q3TCX3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms